Articles | Volume 60, issue 4
https://doi.org/10.5194/aab-60-399-2017
https://doi.org/10.5194/aab-60-399-2017
Original study
 | 
14 Nov 2017
Original study |  | 14 Nov 2017

Short tandem repeat (STR) based genetic diversity and relationship of indigenous Niger cattle

Moustapha Grema, Amadou Traoré, Moumouni Issa, Marichatou Hamani, Maaouia Abdou, Albert Soudré, Moumouni Sanou, Rudolf Pichler, Hamidou H. Tamboura, Yenikoye Alhassane, and Kathiravan Periasamy

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Cited articles

Alvarez, I., Traore, A., Fernández, I., Cuervo, M., Lecomte, T., Soudre, A., Kabore, A., Tamboura, H., and Goyache, F.: Assessing introgression of Sahelian zebu genes into native Bos taurus breeds in Burkina Faso, Mol. Biol. Rep., 41, 3745–3754, 2014.
Antao, T., Lopes, A., Lopes, R. J., Beja-Pereira, A., and Luikart, G.: LOSITAN: a workbench to detect molecular adaptation based on a Fst-outlier method, BMC Bioinformatics, 9, 323, 2008.
Apaa-Okello, J., Barry, M., Gueye, C. A., Jack, J., Marchettini, D., Nose, M., Bin Li, G., and Wang, H.: IMF Country Report No. 15/64, International Monetary Fund, Washington DC, available at: https://www.imf.org/external/pubs/ft/scr/2015/cr1564.pdf (last access: 15 February 2017), 2015.
Arranz, J. J., Bayón, Y., and San Primitivo, F.: Differentiation among Spanish sheep breeds using microsatellites, Genet. Sel. Evol., 33, 529–542, 2001.
Baudouin, L. and Lebrun, P.: An operational Bayesian approach for the identification of sexually reproduced cross-fertilized populations using molecular markers, Acta Hortic., 546, 81–93, 2001.
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Short summary
The present study aimed at characterizing genetic diversity and relationship of 3 Niger cattle breeds (Zebu Arabe, Zebu Bororo and Kuri). High levels of allelic and gene diversity were observed while genetic differentiation was low. High genetic diversity and poor genetic structure might be due to historic zebu–taurine admixture and ongoing breeding practices in the region. The result of this study will help formulate effective strategies for conservation and improvement of Niger cattle breeds.